we usually do our jobe excercises (rotator cuff, etc) before doing any other lifts. is this the right time to do these or should they be done following other lifts?

I agree that you should do them before lifting. I like to do them before throwing also to make sure you get those muscles warmed up.

we do our tubing excercises before throwing and can ( tennis ball can filled with sand after throwing - basically same excercises as jobes in weightroom) after we throw. thanks for answering.